BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D09SP1|AL425858
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1798 1639 0.0
>3x_Contig1798
Length = 38968
Score = 1639 bits (827), Expect = 0.0
Identities = 834/835 (99%), Gaps = 1/835 (0%)
Strand = Plus / Plus
Query: 1 gatccaacatcttgaacctttttcaatttttggaactgcttaatctttttcttaccgagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4718 gatccaacatcttgaacctttttcaatttttggaactgcttaatctttttcttaccgagt 4777
Query: 61 ttatagttaacatacttatcgctccattcaggaactacagactctcggaggtgctcagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 ttatagttaacatacttatcgctccattcaggaactacagactctcggaggtgctcagca 4837
Query: 121 aatttcatctctttgccggatacccaaggggaattagaaaattaaacagactctggatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4838 aatttcatctctttgccggatacccaaggggaattagaaaattaaacagactctggatta 4897
Query: 181 aatcaccttcaccctcttgccctgatattgttgactcacactccaaccatattccttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 aatcaccttcaccctcttgccctgatattgttgactcacactccaaccatattccttaca 4957
Query: 241 caagaagaggtgtatgtgtcgaaatttggaaagatacatgatgtgtgccttcagccaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4958 caagaagaggtgtatgtgtcgaaatttggaaagatacatgatgtgtgccttcagccaagt 5017
Query: 301 aaataccaactatatcccttcataaatcctttcctttctttatatgtctttttgttcgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5018 aaataccaactatatcccttcataaatcctttcctttctttatatgtctttttgttcgca 5077
Query: 361 tatatatttttcgctcaaatcaatgtcacatactgaaagcaaagcacaaacatgatgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5078 tatatatttttcgctcaaatcaatgtcacatactgaaagcaaagcacaaacatgatgctg 5137
Query: 421 gtagtcacgcgtatgctgatttaagtgcgaatttttagatgagtcaaatagaagagatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5138 gtagtcacgcgtatgctgatttaagtgcgaatttttagatgagtcaaatagaagagatca 5197
Query: 481 atggttctgatgatataaacagagacagagatggacgatatttgacgaaaaactggttgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5198 atggttctgatgatataaacagagacagagatggacgatatttgacgaaaaactggttgc 5257
Query: 541 gttatgtacagctcgtgacagtagctactggttttatgatcttgcctcactttgttcacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5258 gttatgtacagctcgtgacagtagctactggttttatgatcttgcctcactttgttcacg 5317
Query: 601 tgatgtacaggatcgttcatctggcgcttcaaagcatcgctatatatagtttatataaat 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5318 tgatgtacaggatcgttcatctggcgcttc-aagcatcgctatatatagtttatataaat 5376
Query: 661 tcctacagaggtaacacaaagcttagacgatgcatacttcgcagcccatgtggcggaatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5377 tcctacagaggtaacacaaagcttagacgatgcatacttcgcagcccatgtggcggaatt 5436
Query: 721 gccgttcttcctaattcctatctctgattatgacctgtcctttcaaatcattcgaacaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5437 gccgttcttcctaattcctatctctgattatgacctgtcctttcaaatcattcgaacaat 5496
Query: 781 tttatttagtttggaatttgaatttttttttttcaagctttcacgctggaaaaat 835
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5497 tttatttagtttggaatttgaatttttttttttcaagctttcacgctggaaaaat 5551
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,215
Number of Sequences: 1807
Number of extensions: 12215
Number of successful extensions: 84
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)